org.jmol.util
Class ContactPair

java.lang.Object
  org.jmol.util.ContactPair

public class ContactPair
extends Object

Field Summary

float	chord
int	contactType
float	d
Atom[]	myAtoms
private int	oldType
Point3f	pt
float[]	radii
float	score
float[]	vdws
double	vdwVolume
double	volume
float	xVdwClash

Constructor Summary

ContactPair(Atom[] atoms, int i1, int i2, float R, float r, float vdwA, float vdwB)

Method Summary

private void	getVolume()
boolean	setForVdwClash(boolean isVdw)
void	switchAtoms()
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

radii

public float[] radii

vdws

public float[] vdws

myAtoms

public Atom[] myAtoms

pt

public Point3f pt

volume

public double volume

vdwVolume

public double vdwVolume

score

public float score

d

public float d

chord

public float chord

contactType

public int contactType

xVdwClash

public float xVdwClash

oldType

private int oldType

Constructor Detail

ContactPair

public ContactPair(Atom[] atoms,
                   int i1,
                   int i2,
                   float R,
                   float r,
                   float vdwA,
                   float vdwB)

Method Detail

getVolume

private void getVolume()

setForVdwClash

public boolean setForVdwClash(boolean isVdw)

switchAtoms

public void switchAtoms()

toString

public String toString()

Overrides:

toString in class Object