Field Detail

• mr

  private MolReader mr

• line

  private String line

• userData

  private Map<String,String[]> userData

Constructor Detail

• V3000Rdr

  public V3000Rdr()

Method Detail

• set

  V3000Rdr set(AtomSetCollectionReader mr)

• readAtomsAndBonds

  void readAtomsAndBonds(String[] tokens)
                  throws Exception

  Throws:

  Exception

• readAtoms

  private void readAtoms(int ac)
                  throws Exception

  Throws:

  Exception

• readBonds

  private void readBonds(int bondCount)
                  throws Exception

  Throws:

  Exception

• readUserData

  private void readUserData(int ac)
                     throws Exception

  Throws:

  Exception

• getField

  private String getField(String key)

• rd

  private String rd()
             throws Exception

  Throws:

  Exception

• checkLineContinuation

  private void checkLineContinuation()
                              throws Exception

  Throws:

  Exception