TopPerc

TopPerc facilitates the input to, the call of and output integration of Percolator. Percolator (http://per-colator.com/) is a tool to apply semi-supervised learning for peptide identification from shotgun proteomics datasets.

Experimental classes:: This tool is work in progress and usage and input requirements might change.

potential predecessor tools	$\longrightarrow$ MSGF+ $\longrightarrow$	potential successor tools
IDFilter		IDMapper

Percolator is search engine sensitive, i.e. it's input has to vary, depending on the search engine.

The command line parameters of this tool are:

INI file documentation of this tool:

Percolator is written by Lukas Käll (http://per-colator.com/ Copyright Lukas Käll lukas.nosp@m..kal.nosp@m.l@sci.nosp@m.life.nosp@m.lab.s.nosp@m.e)