Uses of Class
picard.sam.markduplicates.util.AbstractMarkDuplicatesCommandLineProgram

Packages that use AbstractMarkDuplicatesCommandLineProgram

Package	Description
picard.sam.markduplicates

Uses of AbstractMarkDuplicatesCommandLineProgram in picard.sam.markduplicates

Subclasses of AbstractMarkDuplicatesCommandLineProgram in picard.sam.markduplicates

Modifier and Type	Class and Description
class	MarkDuplicates A better duplication marking algorithm that handles all cases including clipped and gapped alignments.
class	MarkDuplicatesWithMateCigar An even better duplication marking algorithm that handles all cases including clipped and gapped alignments.